RLCP 3.113.90020.1181 :EzCatDB EzCatDB

Hierarchic Classification of Catalytic Mechanisms

R 3.-.-.- : Transfer (bond cleavage and new bond formation) (Reaction)

L 3.113.-.- : Phosphate group from Phosphate oxygen to Carboxyl oxygen (Ligand group involved)

C 3.113.90020.- : DNA polymerase-like mechanism (Stabilizer); Inorganic-cofactor-assisted nucleophilic attack by acceptor group on transferred group; SN2-like direct reaction; Transition state stabilized by cofactor and stabilizer; Inorganic-cofactor interacting with acceptor/transferred/leaving groups (Catalytic mechanism)

P 3.113.90020.1181 : Lys/Asn + two magnesium ions bound to His/Glu/Ser (Residues/cofactors in Protein)

1st Nucleophile : an acceptor group in substrate
Catalytic groups : cofactor + groups in residue/substrate
General Base : non-existent
General Acid : non-existent

Related Enzymes

There is one entry in this class.
  • T00109 : (reaction 1); UDP-N-acetylmuramoylalanine--D-glutamate ligase (Catalytic domain; 3.40.1190.10)