EzCatDB

R L C P
Hierarchic Classification of Catalytic Mechanisms


R 9.-.-.- : Hydride transfer (Reaction)

L 9.5010.-.- : From nicotinamide (NADH/NADPH) to C=O (Ligand group involved)

C 9.5010.536170.- : Shikimate dehydrogenase-like reduction mechanism (Acid/Modulator); Proton-shuttle-like modulation for acid; Modulator-assisted acid protonation of adjacent atom to hydride acceptor; Hydride transfer (Catalytic mechanism)

P 9.5010.536170.118 : Lys/Asp (Residues/cofactors in Protein)


1st Nucleophile : non-existent
Catalytic groups : cofactor + groups in residue/substrate
General Base : a group in substrate/cofactor
General Acid : a group in substrate/cofactor

Related Enzymes

There are 5 entries in this class.
  • D00605 : 1.1.1.282; Quinate/shikimate dehydrogenase (Catalytic domain; 3.40.192.10)
  • D00845 : 1.1.1.25; Shikimate dehydrogenase (Catalytic domain; 3.40.192.10)
  • D00857 : 1.1.1.25; Shikimate 5-dehydrogenase-like protein HI0607 (Catalytic domains; 3.40.50.720, 3.40.192.10)
  • D00858 : 1.1.1.24, 1.1.1.25; Quinate/shikimate dehydrogenase (Catalytic domain; 3.40.192.10)
  • T00414 : (reaction 1) 1.1.1.25, 5.4.99.5; Fusion: chorismate mutase and shikimate 5-dehydrogenase (Catalytic domain; 3.40.192.10)
  • Copyright: Nozomi Nagano, JST & CBRC-AIST
    Funded by PRESTO/Japan Science and Technology Agency (JST) (December 2001 - November 2004)
    Funded by Grant-in-Aid for Publication of Scientific Research Results/Japan Society for the Promotion of Science (JSPS) (April 2005 - March 2006)
    Funded by Grant-in-Aid for Scientific Research (B)/Japan Society for the Promotion of Science (JSPS) (April 2005 - March 2008)
    Funded by BIRD/Japan Science and Technology Agency (JST) (September 2005 - September 2008)
    Funded by BIRD/Japan Science and Technology Agency (JST) (October 2007 - September 2010)
    Funded by Grant-in-Aid for Publication of Scientific Research Results/Japan Society for the Promotion of Science (JSPS) (April 2011 - March 2012)
    Funded by Grant-in-Aid for Publication of Scientific Research Results/Japan Society for the Promotion of Science (JSPS) (April 2012 - March 2013)
    Supported by the commission for the Development of Artificial Gene Synthesis Technology for Creating Innovative Biomaterial from the Ministry of Economy, Trade and Industry (METI) (October 2012 - March 2016)
    Funded by the project commissioned by the New Energy and Industrial Technology Development Organization (NEDO) (April 2016 -)