EzCatDB

R L C P
Hierarchic Classification of Catalytic Mechanisms


R 9.-.-.- : Hydride transfer (Reaction)

L 9.5010.-.- : From nicotinamide (NADH/NADPH) to C=O (Ligand group involved)

C 9.5010.536210.- : GDP mannose dehydratase-final reaction step-like mechanism (Acid/Modulator); Modulator/NAD-assisted acid protonation of adjacent atom through modulator (proton shuttle) to hydride acceptor; Hydride transfer (Catalytic mechanism)

P 9.5010.536210.8010 : Tyr/Ser + Lys bound to ribose-nicotinamide (Residues/cofactors in Protein)


1st Nucleophile : non-existent
Catalytic groups : cofactor + groups in residue/substrate
General Base : a group in substrate/cofactor
General Acid : a group in substrate/cofactor

Related Enzymes

There is one entry in this class.
  • D00513 : (reaction 4) 4.2.1.47; GDP-mannose 4,6 dehydratase 2 (Catalytic domains; 3.40.50.720, 3.90.25.10)
  • Copyright: Nozomi Nagano, JST & CBRC-AIST
    Funded by PRESTO/Japan Science and Technology Agency (JST) (December 2001 - November 2004)
    Funded by Grant-in-Aid for Publication of Scientific Research Results/Japan Society for the Promotion of Science (JSPS) (April 2005 - March 2006)
    Funded by Grant-in-Aid for Scientific Research (B)/Japan Society for the Promotion of Science (JSPS) (April 2005 - March 2008)
    Funded by BIRD/Japan Science and Technology Agency (JST) (September 2005 - September 2008)
    Funded by BIRD/Japan Science and Technology Agency (JST) (October 2007 - September 2010)
    Funded by Grant-in-Aid for Publication of Scientific Research Results/Japan Society for the Promotion of Science (JSPS) (April 2011 - March 2012)
    Funded by Grant-in-Aid for Publication of Scientific Research Results/Japan Society for the Promotion of Science (JSPS) (April 2012 - March 2013)
    Supported by the commission for the Development of Artificial Gene Synthesis Technology for Creating Innovative Biomaterial from the Ministry of Economy, Trade and Industry (METI) (October 2012 - March 2016)
    Funded by the project commissioned by the New Energy and Industrial Technology Development Organization (NEDO) (April 2016 -)